Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.45□□□□□ -0.58
Hcn1O88704 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Gm27046-201ENSMUST00000182160 463 ntBASIC11.45□□□□□ -0.58
Hcn1O88704 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.45□□□□□ -0.58
Hcn1O88704 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.45□□□□□ -0.58
Hcn1O88704 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.45□□□□□ -0.58
Hcn1O88704 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hcn1O88704 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hcn1O88704 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Hcn1O88704 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.45□□□□□ -0.58
Hcn1O88704 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.45□□□□□ -0.58
Hcn1O88704 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.45□□□□□ -0.58
Hcn1O88704 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.45□□□□□ -0.58
Hcn1O88704 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.45□□□□□ -0.58
Hcn1O88704 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Hcn1O88704 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.44□□□□□ -0.58
Hcn1O88704 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hcn1O88704 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Hcn1O88704 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Gm14109-201ENSMUST00000118814 309 ntBASIC11.44□□□□□ -0.58
Hcn1O88704 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.44□□□□□ -0.58
Hcn1O88704 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Hcn1O88704 Gm8885-201ENSMUST00000189382 598 ntBASIC11.44□□□□□ -0.58
Hcn1O88704 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Gm38241-201ENSMUST00000192641 898 ntBASIC11.44□□□□□ -0.58
Hcn1O88704 Gm4857-201ENSMUST00000192718 785 ntBASIC11.44□□□□□ -0.58
Hcn1O88704 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Hcn1O88704 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.44□□□□□ -0.58
Hcn1O88704 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Hcn1O88704 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.44□□□□□ -0.58
Hcn1O88704 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.44□□□□□ -0.58
Hcn1O88704 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hcn1O88704 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Hcn1O88704 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.43□□□□□ -0.58
Hcn1O88704 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.43□□□□□ -0.58
Hcn1O88704 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.43□□□□□ -0.58
Hcn1O88704 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms