Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.75□□□□□ -0.53
ClppO88696 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.75□□□□□ -0.53
ClppO88696 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.75□□□□□ -0.53
ClppO88696 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ClppO88696 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.75□□□□□ -0.53
ClppO88696 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
ClppO88696 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
ClppO88696 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Gm9083-201ENSMUST00000120423 819 ntBASIC11.74□□□□□ -0.53
ClppO88696 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.74□□□□□ -0.53
ClppO88696 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.74□□□□□ -0.53
ClppO88696 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Gm25732-201ENSMUST00000175168 60 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm29615-201ENSMUST00000185371 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm28224-201ENSMUST00000186078 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm29001-201ENSMUST00000186177 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm28292-201ENSMUST00000186593 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm28101-201ENSMUST00000187608 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm29076-201ENSMUST00000187689 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm28302-201ENSMUST00000187931 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm28646-201ENSMUST00000188220 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm28205-201ENSMUST00000189177 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm29032-201ENSMUST00000189797 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.74□□□□□ -0.53
ClppO88696 Gm28695-201ENSMUST00000190300 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm37448-201ENSMUST00000192795 697 ntBASIC11.74□□□□□ -0.53
ClppO88696 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.74□□□□□ -0.53
ClppO88696 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.74□□□□□ -0.53
ClppO88696 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClppO88696 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClppO88696 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClppO88696 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClppO88696 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClppO88696 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ClppO88696 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClppO88696 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClppO88696 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClppO88696 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClppO88696 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.73□□□□□ -0.53
ClppO88696 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClppO88696 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.73□□□□□ -0.53
ClppO88696 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.73□□□□□ -0.53
ClppO88696 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.73□□□□□ -0.53
ClppO88696 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ClppO88696 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.73□□□□□ -0.53
ClppO88696 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.73□□□□□ -0.53
ClppO88696 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.73□□□□□ -0.53
ClppO88696 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClppO88696 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.73□□□□□ -0.53
ClppO88696 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
ClppO88696 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms