Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cops4O88544 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11□□□□□ -0.65
Cops4O88544 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Gm18262-201ENSMUST00000222560 1946 ntBASIC11□□□□□ -0.65
Cops4O88544 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11□□□□□ -0.65
Cops4O88544 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Gm13492-201ENSMUST00000119772 665 ntBASIC11□□□□□ -0.65
Cops4O88544 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11□□□□□ -0.65
Cops4O88544 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Gm18304-201ENSMUST00000189162 546 ntBASIC11□□□□□ -0.65
Cops4O88544 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cops4O88544 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
Cops4O88544 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cops4O88544 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cops4O88544 Gm8420-201ENSMUST00000097103 598 ntBASIC11□□□□□ -0.65
Cops4O88544 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Cops4O88544 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11□□□□□ -0.65
Cops4O88544 Gm37969-201ENSMUST00000195777 3409 ntBASIC11□□□□□ -0.65
Cops4O88544 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cops4O88544 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cops4O88544 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cops4O88544 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cops4O88544 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.99□□□□□ -0.65
Cops4O88544 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.99□□□□□ -0.65
Cops4O88544 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Cops4O88544 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.99□□□□□ -0.65
Cops4O88544 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Cops4O88544 Gm1335-201ENSMUST00000121653 386 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.99□□□□□ -0.65
Cops4O88544 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.99□□□□□ -0.65
Cops4O88544 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cops4O88544 Gm26927-201ENSMUST00000182385 965 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Gm43818-201ENSMUST00000200605 466 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.99□□□□□ -0.65
Cops4O88544 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.99□□□□□ -0.65
Cops4O88544 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cops4O88544 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cops4O88544 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cops4O88544 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.99□□□□□ -0.65
Cops4O88544 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cops4O88544 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Cops4O88544 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cops4O88544 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cops4O88544 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cops4O88544 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cops4O88544 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cops4O88544 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms