Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.15□□□□□ -0.14
Smarce1O54941 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Gm42627-201ENSMUST00000197347 224 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarce1O54941 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Smarce1O54941 Gm8420-201ENSMUST00000097103 598 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarce1O54941 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Smarce1O54941 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Smarce1O54941 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarce1O54941 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Smarce1O54941 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smarce1O54941 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smarce1O54941 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smarce1O54941 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarce1O54941 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Gm11531-201ENSMUST00000117614 555 ntBASIC14.14□□□□□ -0.15
Smarce1O54941 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Smarce1O54941 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.14□□□□□ -0.15
Smarce1O54941 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.14□□□□□ -0.15
Smarce1O54941 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.14□□□□□ -0.15
Smarce1O54941 Morn2-202ENSMUST00000227729 656 ntBASIC14.14□□□□□ -0.15
Smarce1O54941 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smarce1O54941 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.14□□□□□ -0.15
Smarce1O54941 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarce1O54941 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.13□□□□□ -0.15
Smarce1O54941 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smarce1O54941 Gm13829-201ENSMUST00000119600 138 ntBASIC14.13□□□□□ -0.15
Smarce1O54941 Gm7722-201ENSMUST00000120646 741 ntBASIC14.13□□□□□ -0.15
Smarce1O54941 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.13□□□□□ -0.15
Smarce1O54941 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Mir1982-201ENSMUST00000157368 74 ntBASIC14.13□□□□□ -0.15
Smarce1O54941 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.13□□□□□ -0.15
Smarce1O54941 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.13□□□□□ -0.15
Smarce1O54941 Gm38002-201ENSMUST00000193255 180 ntBASIC14.13□□□□□ -0.15
Smarce1O54941 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.13□□□□□ -0.15
Smarce1O54941 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.13□□□□□ -0.15
Smarce1O54941 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.13□□□□□ -0.15
Smarce1O54941 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Smarce1O54941 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Smarce1O54941 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smarce1O54941 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smarce1O54941 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarce1O54941 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarce1O54941 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smarce1O54941 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms