Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm8420-201ENSMUST00000097103 598 ntBASIC9.43□□□□□ -0.9
Efnb3O35393 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Efnb3O35393 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.43□□□□□ -0.9
Efnb3O35393 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.43□□□□□ -0.9
Efnb3O35393 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Efnb3O35393 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.43□□□□□ -0.9
Efnb3O35393 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Efnb3O35393 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.43□□□□□ -0.9
Efnb3O35393 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Efnb3O35393 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Efnb3O35393 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Efnb3O35393 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Efnb3O35393 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Gm16177-201ENSMUST00000120728 718 ntBASIC9.42□□□□□ -0.9
Efnb3O35393 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC9.42□□□□□ -0.9
Efnb3O35393 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.42□□□□□ -0.9
Efnb3O35393 Snora78-201ENSMUST00000158630 128 ntBASIC9.42□□□□□ -0.9
Efnb3O35393 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Efnb3O35393 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.42□□□□□ -0.9
Efnb3O35393 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.42□□□□□ -0.9
Efnb3O35393 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Efnb3O35393 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.42□□□□□ -0.9
Efnb3O35393 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Efnb3O35393 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Efnb3O35393 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.42□□□□□ -0.9
Efnb3O35393 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Efnb3O35393 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Efnb3O35393 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Efnb3O35393 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.41□□□□□ -0.9
Efnb3O35393 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.41□□□□□ -0.9
Efnb3O35393 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Efnb3O35393 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.41□□□□□ -0.9
Efnb3O35393 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.41□□□□□ -0.9
Efnb3O35393 Gm14660-201ENSMUST00000119809 575 ntBASIC9.41□□□□□ -0.9
Efnb3O35393 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.41□□□□□ -0.9
Efnb3O35393 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.41□□□□□ -0.9
Efnb3O35393 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Efnb3O35393 Gm27731-201ENSMUST00000185192 107 ntBASIC9.41□□□□□ -0.9
Efnb3O35393 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.41□□□□□ -0.9
Efnb3O35393 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.41□□□□□ -0.9
Efnb3O35393 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms