Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Gm45930-201ENSMUST00000221330 292 ntBASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa8J3QNX5 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.85□□□□□ -0.67
Shisa8J3QNX5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gm11591-201ENSMUST00000120063 702 ntBASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gm27486-201ENSMUST00000184923 80 ntBASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gm17794-201ENSMUST00000220252 955 ntBASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.85□□□□□ -0.67
Shisa8J3QNX5 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa8J3QNX5 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.85□□□□□ -0.67
Shisa8J3QNX5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Gm24934-201ENSMUST00000103764 111 ntBASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Gm16177-201ENSMUST00000120728 718 ntBASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Gm14999-201ENSMUST00000121039 624 ntBASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Gm1335-201ENSMUST00000121653 386 ntBASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Gm18584-201ENSMUST00000203098 964 ntBASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms