Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Gm13422-201ENSMUST00000118834 504 ntBASIC16.42■□□□□ 0.22
Scaf11E9PZM7 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Gm16305-201ENSMUST00000140747 556 ntBASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Mir6953-201ENSMUST00000184745 68 ntBASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Gm2345-201ENSMUST00000193451 589 ntBASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Gm7939-201ENSMUST00000201233 1050 ntBASIC16.42■□□□□ 0.22
Scaf11E9PZM7 BC080696-201ENSMUST00000202858 1218 ntBASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Scaf11E9PZM7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm15982-201ENSMUST00000121681 554 ntBASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm29304-201ENSMUST00000186555 695 ntBASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm29223-201ENSMUST00000188867 695 ntBASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm8384-201ENSMUST00000190905 704 ntBASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm37921-201ENSMUST00000194333 695 ntBASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm43506-201ENSMUST00000200675 753 ntBASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm44124-201ENSMUST00000204159 472 ntBASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 AC134248.1-201ENSMUST00000216113 1176 ntBASIC16.41■□□□□ 0.22
Scaf11E9PZM7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scaf11E9PZM7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Gm44758-201ENSMUST00000206096 2068 ntBASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Gm13094-201ENSMUST00000117930 409 ntBASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 AC152169.1-201ENSMUST00000223901 701 ntBASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scaf11E9PZM7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.39■□□□□ 0.22
Scaf11E9PZM7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC16.39■□□□□ 0.22
Scaf11E9PZM7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC16.39■□□□□ 0.22
Scaf11E9PZM7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Scaf11E9PZM7 Gm8155-201ENSMUST00000216363 1612 ntBASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Gm25562-201ENSMUST00000104608 133 ntBASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scaf11E9PZM7 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms