Protein–RNA interactions for Protein: E9PV82

Fam53a, Protein FAM53A, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53aE9PV82 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fam53aE9PV82 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fam53aE9PV82 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fam53aE9PV82 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Fam53aE9PV82 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fam53aE9PV82 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fam53aE9PV82 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fam53aE9PV82 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.68□□□□□ -0.7
Fam53aE9PV82 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Fam53aE9PV82 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fam53aE9PV82 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Gm11941-201ENSMUST00000119904 610 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Gm8199-201ENSMUST00000121323 823 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Gm23085-201ENSMUST00000157849 293 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Gm6114-201ENSMUST00000182472 968 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Mir6979-201ENSMUST00000183927 56 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Gm45575-201ENSMUST00000210283 548 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.67□□□□□ -0.7
Fam53aE9PV82 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Fam53aE9PV82 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Fam53aE9PV82 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.66□□□□□ -0.7
Fam53aE9PV82 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fam53aE9PV82 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.66□□□□□ -0.7
Fam53aE9PV82 Gm23251-201ENSMUST00000103773 110 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms