Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Gm11439-201ENSMUST00000118598 409 ntBASIC10.85□□□□□ -0.67
Gm3543D3Z235 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.85□□□□□ -0.67
Gm3543D3Z235 Gm9083-201ENSMUST00000120423 819 ntBASIC10.85□□□□□ -0.67
Gm3543D3Z235 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.85□□□□□ -0.67
Gm3543D3Z235 Gm44262-201ENSMUST00000204969 372 ntBASIC10.85□□□□□ -0.67
Gm3543D3Z235 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.85□□□□□ -0.67
Gm3543D3Z235 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.85□□□□□ -0.67
Gm3543D3Z235 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.84□□□□□ -0.67
Gm3543D3Z235 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm44882-201ENSMUST00000205702 802 ntBASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm45433-201ENSMUST00000209386 247 ntBASIC10.84□□□□□ -0.67
Gm3543D3Z235 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.84□□□□□ -0.67
Gm3543D3Z235 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.84□□□□□ -0.67
Gm3543D3Z235 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.84□□□□□ -0.67
Gm3543D3Z235 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3543D3Z235 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.84□□□□□ -0.67
Gm3543D3Z235 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms