Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.23□□□□□ -0.29
Krt28A6BLY7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Matn2-206ENSMUST00000228570 2798 ntBASIC13.22□□□□□ -0.29
Krt28A6BLY7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.22□□□□□ -0.29
Krt28A6BLY7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Krt28A6BLY7 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Gm4034-201ENSMUST00000187674 480 ntBASIC13.22□□□□□ -0.29
Krt28A6BLY7 Gm28833-201ENSMUST00000189671 559 ntBASIC13.22□□□□□ -0.29
Krt28A6BLY7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.22□□□□□ -0.29
Krt28A6BLY7 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.22□□□□□ -0.29
Krt28A6BLY7 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.22□□□□□ -0.29
Krt28A6BLY7 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.22□□□□□ -0.29
Krt28A6BLY7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt28A6BLY7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm25053-201ENSMUST00000103982 133 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm25922-201ENSMUST00000104281 130 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm11578-201ENSMUST00000118530 459 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm12712-201ENSMUST00000120676 801 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm24679-201ENSMUST00000158762 111 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm8459-201ENSMUST00000162504 760 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm25053-202ENSMUST00000199731 132 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 Trav11n-201ENSMUST00000200113 343 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm29763-201ENSMUST00000205306 616 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm7082-201ENSMUST00000209880 969 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.21□□□□□ -0.29
Krt28A6BLY7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt28A6BLY7 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.21□□□□□ -0.3
Krt28A6BLY7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Krt28A6BLY7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Krt28A6BLY7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Krt28A6BLY7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Krt28A6BLY7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Krt28A6BLY7 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.21□□□□□ -0.3
Krt28A6BLY7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt28A6BLY7 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.21□□□□□ -0.3
Krt28A6BLY7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Krt28A6BLY7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.21□□□□□ -0.3
Krt28A6BLY7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt28A6BLY7 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.2□□□□□ -0.3
Krt28A6BLY7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt28A6BLY7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt28A6BLY7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt28A6BLY7 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.2□□□□□ -0.3
Krt28A6BLY7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Krt28A6BLY7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.2□□□□□ -0.3
Krt28A6BLY7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms