Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smarcb1Q9Z0H3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Smarcb1Q9Z0H3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm12579-201ENSMUST00000118040 783 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm11783-201ENSMUST00000119549 885 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm14441-201ENSMUST00000121960 540 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm17391-201ENSMUST00000171036 126 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm23045-201ENSMUST00000175041 96 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Mir6546-201ENSMUST00000184460 62 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm45398-201ENSMUST00000210561 165 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm7940-201ENSMUST00000218195 769 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Cog3-203ENSMUST00000227473 4197 ntBASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Smarcb1Q9Z0H3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Map1b-203ENSMUST00000223725 2669 ntBASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Gm44506-201ENSMUST00000206278 965 ntBASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Gm29787-201ENSMUST00000222129 849 ntBASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms