Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
ClcnkaQ9WUB7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClcnkaQ9WUB7 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Gm14109-201ENSMUST00000118814 309 ntBASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClcnkaQ9WUB7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Rprl1-201ENSMUST00000158050 327 ntBASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm20482-202ENSMUST00000174729 825 ntBASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm43438-201ENSMUST00000198133 379 ntBASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm18711-201ENSMUST00000199341 750 ntBASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm19994-201ENSMUST00000217086 586 ntBASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
ClcnkaQ9WUB7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms