Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Gm9062-201ENSMUST00000117712 727 ntBASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Gm4726-201ENSMUST00000135604 736 ntBASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Gm6019-201ENSMUST00000148369 736 ntBASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Gm21778-201ENSMUST00000178779 471 ntBASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Gm10254-201ENSMUST00000052888 867 ntBASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Gm13611-201ENSMUST00000118269 318 ntBASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Gm8365-201ENSMUST00000197334 648 ntBASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Gm43002-201ENSMUST00000200310 155 ntBASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Gm24891-201ENSMUST00000104391 136 ntBASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn8aQ9WTU3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Gm25076-201ENSMUST00000104098 132 ntBASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms