Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.28□□□□□ -0.6
Trim39Q9ESN2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.28□□□□□ -0.6
Trim39Q9ESN2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim39Q9ESN2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim39Q9ESN2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Gm23931-201ENSMUST00000103842 109 ntBASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Gm6023-201ENSMUST00000118217 606 ntBASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Gm11964-201ENSMUST00000120982 444 ntBASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim39Q9ESN2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Gm22018-201ENSMUST00000104357 131 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Gm12957-201ENSMUST00000117835 377 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Gm8062-201ENSMUST00000139696 444 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Gm19184-201ENSMUST00000196798 928 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Gm40332-201ENSMUST00000199847 938 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 CT009495.1-201ENSMUST00000224221 862 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim39Q9ESN2 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms