Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtofQ9ESF1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtofQ9ESF1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
OtofQ9ESF1 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.8□□□□□ -0.52
OtofQ9ESF1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtofQ9ESF1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
OtofQ9ESF1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.8□□□□□ -0.52
OtofQ9ESF1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtofQ9ESF1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtofQ9ESF1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtofQ9ESF1 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.79□□□□□ -0.52
OtofQ9ESF1 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.79□□□□□ -0.52
OtofQ9ESF1 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
OtofQ9ESF1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.78□□□□□ -0.52
OtofQ9ESF1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Mir1901-201ENSMUST00000122616 78 ntBASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm4654-201ENSMUST00000183305 982 ntBASIC11.78□□□□□ -0.52
OtofQ9ESF1 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.78□□□□□ -0.52
OtofQ9ESF1 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.78□□□□□ -0.52
OtofQ9ESF1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm23272-201ENSMUST00000104053 129 ntBASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm8459-201ENSMUST00000162504 760 ntBASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm37299-201ENSMUST00000193951 826 ntBASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm44315-201ENSMUST00000203041 219 ntBASIC11.78□□□□□ -0.52
OtofQ9ESF1 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.78□□□□□ -0.52
OtofQ9ESF1 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.78□□□□□ -0.52
OtofQ9ESF1 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms