Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Gm13916-201ENSMUST00000117368 628 ntBASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Gm13408-201ENSMUST00000119822 798 ntBASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Gm13935-201ENSMUST00000121859 798 ntBASIC14.21□□□□□ -0.13
Ube3bQ9ES34 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Gm9211-201ENSMUST00000182882 975 ntBASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3bQ9ES34 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.21□□□□□ -0.13
Ube3bQ9ES34 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube3bQ9ES34 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube3bQ9ES34 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.21□□□□□ -0.14
Ube3bQ9ES34 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Ube3bQ9ES34 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm15432-201ENSMUST00000121106 195 ntBASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm22885-201ENSMUST00000157410 107 ntBASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm9540-201ENSMUST00000188230 478 ntBASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm43947-201ENSMUST00000203019 959 ntBASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm8959-201ENSMUST00000213150 571 ntBASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube3bQ9ES34 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm8731-201ENSMUST00000118088 412 ntBASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm35960-201ENSMUST00000202712 767 ntBASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms