Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm37424-201ENSMUST00000191727 561 ntBASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm18062-201ENSMUST00000208020 547 ntBASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm18055-201ENSMUST00000208254 547 ntBASIC11.79□□□□□ -0.52
Lima1Q9ERG0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 BC043934-202ENSMUST00000185694 2356 ntBASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.78□□□□□ -0.52
Lima1Q9ERG0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.78□□□□□ -0.52
Lima1Q9ERG0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gm18304-201ENSMUST00000189162 546 ntBASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gm9136-201ENSMUST00000193368 454 ntBASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gm19309-201ENSMUST00000218295 205 ntBASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.78□□□□□ -0.52
Lima1Q9ERG0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Lima1Q9ERG0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lima1Q9ERG0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.77□□□□□ -0.52
Lima1Q9ERG0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.77□□□□□ -0.52
Lima1Q9ERG0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lima1Q9ERG0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lima1Q9ERG0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lima1Q9ERG0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lima1Q9ERG0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lima1Q9ERG0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.77□□□□□ -0.52
Lima1Q9ERG0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lima1Q9ERG0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms