Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Mir181d-201ENSMUST00000102383 72 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gm12274-201ENSMUST00000120062 385 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gm14993-201ENSMUST00000121180 164 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gm8459-201ENSMUST00000162504 760 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gm18776-201ENSMUST00000188833 654 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gm42433-201ENSMUST00000196806 940 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gm30671-201ENSMUST00000214898 318 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-4Q9EQM3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm25053-201ENSMUST00000103982 133 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm25922-201ENSMUST00000104281 130 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms