Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm26083-201ENSMUST00000157904 193 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm9192-201ENSMUST00000183221 985 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm29615-201ENSMUST00000185371 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm28224-201ENSMUST00000186078 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm29001-201ENSMUST00000186177 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm28292-201ENSMUST00000186593 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm28101-201ENSMUST00000187608 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm29076-201ENSMUST00000187689 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm28302-201ENSMUST00000187931 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm28646-201ENSMUST00000188220 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm28205-201ENSMUST00000189177 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm29032-201ENSMUST00000189797 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm28695-201ENSMUST00000190300 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm37448-201ENSMUST00000192795 697 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm8913-201ENSMUST00000209491 641 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm17827-201ENSMUST00000211825 742 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm5705-201ENSMUST00000066241 711 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Gm8343-201ENSMUST00000182705 994 ntBASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Gm2553-201ENSMUST00000215986 605 ntBASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf6Q9DBU5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf6Q9DBU5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms