Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rrp8Q9DB85 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rrp8Q9DB85 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rrp8Q9DB85 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Rrp8Q9DB85 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rrp8Q9DB85 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Gm4310-201ENSMUST00000177847 889 ntBASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Mir8115-201ENSMUST00000184992 119 ntBASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Rrp8Q9DB85 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Gm11340-201ENSMUST00000119226 412 ntBASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Gm11836-201ENSMUST00000121022 441 ntBASIC11.71□□□□□ -0.53
Rrp8Q9DB85 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Gm21092-201ENSMUST00000178995 955 ntBASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Gm3793-201ENSMUST00000204973 672 ntBASIC11.71□□□□□ -0.53
Rrp8Q9DB85 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.71□□□□□ -0.53
Rrp8Q9DB85 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rrp8Q9DB85 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Rrp8Q9DB85 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms