Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.24□□□□□ -0.13
Stag1Q9D3E6 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Gm38117-201ENSMUST00000194653 939 ntBASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.24□□□□□ -0.13
Stag1Q9D3E6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Stag1Q9D3E6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Paupar-201ENSMUST00000194826 3482 ntBASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Gm8737-201ENSMUST00000122208 642 ntBASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Gm10752-201ENSMUST00000218348 729 ntBASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.23□□□□□ -0.13
Stag1Q9D3E6 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stag1Q9D3E6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gm11949-201ENSMUST00000117640 372 ntBASIC14.22□□□□□ -0.13
Stag1Q9D3E6 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gm11246-201ENSMUST00000120880 345 ntBASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gm23045-201ENSMUST00000175041 96 ntBASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gm42599-201ENSMUST00000201308 469 ntBASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.22□□□□□ -0.13
Stag1Q9D3E6 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms