Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ssu72Q9CY97 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ssu72Q9CY97 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gm18893-201ENSMUST00000198416 943 ntBASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gm43818-201ENSMUST00000200605 466 ntBASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 CT009738.1-201ENSMUST00000219031 809 ntBASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssu72Q9CY97 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Gm27839-201ENSMUST00000184242 106 ntBASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Snora73a-201ENSMUST00000082453 205 ntBASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms