Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.03□□□□□ -0.16
Smc3Q9CW03 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Gm19994-201ENSMUST00000217086 586 ntBASIC14.03□□□□□ -0.16
Smc3Q9CW03 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.03□□□□□ -0.16
Smc3Q9CW03 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smc3Q9CW03 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smc3Q9CW03 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smc3Q9CW03 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc3Q9CW03 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc3Q9CW03 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc3Q9CW03 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.02□□□□□ -0.16
Smc3Q9CW03 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.02□□□□□ -0.16
Smc3Q9CW03 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.02□□□□□ -0.16
Smc3Q9CW03 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smc3Q9CW03 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc3Q9CW03 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Smc3Q9CW03 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc3Q9CW03 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.02□□□□□ -0.17
Smc3Q9CW03 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Gm18187-201ENSMUST00000196476 984 ntBASIC14.02□□□□□ -0.17
Smc3Q9CW03 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Gm45880-201ENSMUST00000213041 853 ntBASIC14.02□□□□□ -0.17
Smc3Q9CW03 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc3Q9CW03 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smc3Q9CW03 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.01□□□□□ -0.17
Smc3Q9CW03 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Gm7722-201ENSMUST00000120646 741 ntBASIC14.01□□□□□ -0.17
Smc3Q9CW03 Gm12164-201ENSMUST00000121695 551 ntBASIC14.01□□□□□ -0.17
Smc3Q9CW03 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Gm5745-201ENSMUST00000183748 313 ntBASIC14.01□□□□□ -0.17
Smc3Q9CW03 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.01□□□□□ -0.17
Smc3Q9CW03 Gm19309-201ENSMUST00000218295 205 ntBASIC14.01□□□□□ -0.17
Smc3Q9CW03 Morn2-202ENSMUST00000227729 656 ntBASIC14.01□□□□□ -0.17
Smc3Q9CW03 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smc3Q9CW03 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smc3Q9CW03 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc3Q9CW03 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc3Q9CW03 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc3Q9CW03 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc3Q9CW03 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc3Q9CW03 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Smc3Q9CW03 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Smc3Q9CW03 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms