Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smurf1Q9CUN6 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.87□□□□□ -0.67
Smurf1Q9CUN6 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Gm8805-201ENSMUST00000117848 313 ntBASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Gm12036-201ENSMUST00000120008 530 ntBASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Gm10156-201ENSMUST00000122364 462 ntBASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Gm26185-201ENSMUST00000157692 266 ntBASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smurf1Q9CUN6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms