Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Gm24248-201ENSMUST00000157321 322 ntBASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm12274-201ENSMUST00000120062 385 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm26047-201ENSMUST00000157308 113 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm19587-201ENSMUST00000191395 545 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm5700-201ENSMUST00000191483 989 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm26047-202ENSMUST00000198840 115 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldnd1Q9CQX5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm22846-201ENSMUST00000157706 270 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms