Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Rps4l-201ENSMUST00000071745 943 ntBASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Gm44914-201ENSMUST00000207191 2720 ntBASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Vmn2r-ps97-201ENSMUST00000222427 1970 ntBASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Gm38297-201ENSMUST00000195122 1057 ntBASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Gm44985-201ENSMUST00000206202 1016 ntBASIC13□□□□□ -0.33
Gtf2a1Q99PM3 AC135669.1-202ENSMUST00000216742 540 ntBASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gtf2a1Q99PM3 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Gm7862-201ENSMUST00000121461 292 ntBASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Gm9136-201ENSMUST00000193368 454 ntBASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2a1Q99PM3 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms