Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac9Q99N13 Gm26047-202ENSMUST00000198840 115 ntBASIC14.06□□□□□ -0.16
Hdac9Q99N13 AC154184.3-201ENSMUST00000225620 1090 ntBASIC14.06□□□□□ -0.16
Hdac9Q99N13 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.06□□□□□ -0.16
Hdac9Q99N13 Gm25517-201ENSMUST00000083865 134 ntBASIC14.06□□□□□ -0.16
Hdac9Q99N13 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.06□□□□□ -0.16
Hdac9Q99N13 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.06□□□□□ -0.16
Hdac9Q99N13 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac9Q99N13 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac9Q99N13 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.06□□□□□ -0.16
Hdac9Q99N13 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.06□□□□□ -0.16
Hdac9Q99N13 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac9Q99N13 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac9Q99N13 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac9Q99N13 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hdac9Q99N13 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.05□□□□□ -0.16
Hdac9Q99N13 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Gm25951-201ENSMUST00000175330 64 ntBASIC14.05□□□□□ -0.16
Hdac9Q99N13 Gm37981-201ENSMUST00000194280 535 ntBASIC14.05□□□□□ -0.16
Hdac9Q99N13 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.05□□□□□ -0.16
Hdac9Q99N13 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.05□□□□□ -0.16
Hdac9Q99N13 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac9Q99N13 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.04□□□□□ -0.16
Hdac9Q99N13 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Gm16166-201ENSMUST00000118291 787 ntBASIC14.04□□□□□ -0.16
Hdac9Q99N13 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Gm22877-201ENSMUST00000175451 105 ntBASIC14.04□□□□□ -0.16
Hdac9Q99N13 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Gm45113-201ENSMUST00000207518 165 ntBASIC14.04□□□□□ -0.16
Hdac9Q99N13 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Gm45594-201ENSMUST00000211717 241 ntBASIC14.04□□□□□ -0.16
Hdac9Q99N13 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Gm23680-201ENSMUST00000083162 164 ntBASIC14.04□□□□□ -0.16
Hdac9Q99N13 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.04□□□□□ -0.16
Hdac9Q99N13 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac9Q99N13 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.03□□□□□ -0.16
Hdac9Q99N13 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms