Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tlr3Q99MB1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tlr3Q99MB1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.85□□□□□ -0.35
Tlr3Q99MB1 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tlr3Q99MB1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tlr3Q99MB1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tlr3Q99MB1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tlr3Q99MB1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Gm11511-201ENSMUST00000118146 540 ntBASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Gm25700-201ENSMUST00000177693 110 ntBASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.84□□□□□ -0.35
Tlr3Q99MB1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tlr3Q99MB1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tlr3Q99MB1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tlr3Q99MB1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.83□□□□□ -0.35
Tlr3Q99MB1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Gm14208-201ENSMUST00000119645 678 ntBASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Gm43947-201ENSMUST00000203019 959 ntBASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Gm43962-201ENSMUST00000203898 190 ntBASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.83□□□□□ -0.36
Tlr3Q99MB1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.82□□□□□ -0.36
Tlr3Q99MB1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms