Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm14667-201ENSMUST00000119448 1350 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm28937-201ENSMUST00000185413 695 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm29400-201ENSMUST00000187208 695 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm28662-201ENSMUST00000188446 695 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm28251-201ENSMUST00000188835 695 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm37318-201ENSMUST00000194325 695 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm38017-201ENSMUST00000194768 695 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm37287-201ENSMUST00000195449 695 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm37793-201ENSMUST00000195548 695 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm18059-201ENSMUST00000208073 580 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm5805-201ENSMUST00000072779 456 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.6□□□□□ -0.39
Clp1Q99LI9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clp1Q99LI9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm14892-201ENSMUST00000117636 267 ntBASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm13022-201ENSMUST00000121181 285 ntBASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm11244-201ENSMUST00000121243 237 ntBASIC12.59□□□□□ -0.39
Clp1Q99LI9 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm20392-201ENSMUST00000173047 701 ntBASIC12.59□□□□□ -0.39
Clp1Q99LI9 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.59□□□□□ -0.39
Clp1Q99LI9 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.59□□□□□ -0.39
Clp1Q99LI9 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.59□□□□□ -0.39
Clp1Q99LI9 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clp1Q99LI9 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms