Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Clcc1Q99LI2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcc1Q99LI2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcc1Q99LI2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Gm7851-201ENSMUST00000117574 323 ntBASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Gm13045-201ENSMUST00000119019 712 ntBASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Gm45770-201ENSMUST00000212105 616 ntBASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcc1Q99LI2 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Gm3508-201ENSMUST00000186012 792 ntBASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcc1Q99LI2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Gm12857-201ENSMUST00000117678 592 ntBASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Gm11511-201ENSMUST00000118146 540 ntBASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Clcc1Q99LI2 Gm19459-201ENSMUST00000176240 835 ntBASIC11.8□□□□□ -0.52
Clcc1Q99LI2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms