Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.84□□□□□ -0.19
Smc1bQ920F6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Gm37246-201ENSMUST00000192665 835 ntBASIC13.84□□□□□ -0.19
Smc1bQ920F6 Gm4482-201ENSMUST00000200876 742 ntBASIC13.84□□□□□ -0.19
Smc1bQ920F6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.84□□□□□ -0.19
Smc1bQ920F6 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.84□□□□□ -0.19
Smc1bQ920F6 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Ginm1-202ENSMUST00000065124 300 ntBASIC13.84□□□□□ -0.19
Smc1bQ920F6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Smc1bQ920F6 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Smc1bQ920F6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.83□□□□□ -0.19
Smc1bQ920F6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Smc1bQ920F6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Smc1bQ920F6 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Smc1bQ920F6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smc1bQ920F6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Smc1bQ920F6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm12314-201ENSMUST00000118104 538 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm25881-201ENSMUST00000157783 103 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm25951-201ENSMUST00000175330 64 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Mir7677-201ENSMUST00000184226 67 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm44124-201ENSMUST00000204159 472 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm4607-201ENSMUST00000206649 577 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm270-201ENSMUST00000223010 976 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.83□□□□□ -0.2
Smc1bQ920F6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1bQ920F6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms