Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm12380-201ENSMUST00000119012 544 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm5419-201ENSMUST00000119301 527 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm12164-201ENSMUST00000121695 551 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm17040-202ENSMUST00000170597 889 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm22119-201ENSMUST00000175594 99 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm5706-201ENSMUST00000181525 993 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm4157-201ENSMUST00000211647 679 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm26448-201ENSMUST00000082446 203 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb2Q91Y00 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Gm7857-201ENSMUST00000117957 358 ntBASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Gm14542-201ENSMUST00000118460 1248 ntBASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Gm12217-201ENSMUST00000118858 696 ntBASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb2Q91Y00 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Gm4909-201ENSMUST00000118749 794 ntBASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Gm270-201ENSMUST00000223010 976 ntBASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb2Q91Y00 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb2Q91Y00 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.71□□□□□ -0.38
Pcdhb2Q91Y00 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb2Q91Y00 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb2Q91Y00 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb2Q91Y00 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.71□□□□□ -0.38
Pcdhb2Q91Y00 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms