Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Mir7076-201ENSMUST00000183519 74 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm5733-201ENSMUST00000190232 939 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm43184-201ENSMUST00000197247 542 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm25517-201ENSMUST00000083865 134 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Gm11451-201ENSMUST00000118946 630 ntBASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Gm15573-201ENSMUST00000119487 540 ntBASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Gm17831-201ENSMUST00000205579 900 ntBASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Gm2517-201ENSMUST00000215651 348 ntBASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Gm9996-201ENSMUST00000070359 913 ntBASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga6Q91XY2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.96□□□□□ -0.49
Pcdhga6Q91XY2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga6Q91XY2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.96□□□□□ -0.49
Pcdhga6Q91XY2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga6Q91XY2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga6Q91XY2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhga6Q91XY2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga6Q91XY2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhga6Q91XY2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms