Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.45□□□□□ -0.42
Usp3Q91W36 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp3Q91W36 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 AC122539.3-201ENSMUST00000218355 1431 ntBASIC12.45□□□□□ -0.42
Usp3Q91W36 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp3Q91W36 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp3Q91W36 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm12036-201ENSMUST00000120008 530 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp3Q91W36 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm25732-201ENSMUST00000175168 60 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm8343-201ENSMUST00000182705 994 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp3Q91W36 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Usp3Q91W36 AU022133-201ENSMUST00000200601 873 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 Rps4l-202ENSMUST00000204242 789 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm44760-201ENSMUST00000206375 1173 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp3Q91W36 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 Ermard-209ENSMUST00000226561 1019 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.44□□□□□ -0.42
Usp3Q91W36 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp3Q91W36 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp3Q91W36 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Pck2-205ENSMUST00000226352 2784 ntBASIC12.43□□□□□ -0.42
Usp3Q91W36 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.43□□□□□ -0.42
Usp3Q91W36 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Mir6927-201ENSMUST00000184494 71 ntBASIC12.43□□□□□ -0.42
Usp3Q91W36 Gm37517-201ENSMUST00000194004 1289 ntBASIC12.43□□□□□ -0.42
Usp3Q91W36 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Gm8956-201ENSMUST00000203939 825 ntBASIC12.43□□□□□ -0.42
Usp3Q91W36 Gm17931-201ENSMUST00000208132 634 ntBASIC12.43□□□□□ -0.42
Usp3Q91W36 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Usp3Q91W36 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms