Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Cog3-203ENSMUST00000227473 4197 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Gm11439-201ENSMUST00000118598 409 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Gm15711-201ENSMUST00000118889 535 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Gm28071-201ENSMUST00000190355 478 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a1Q8K4Z5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Gm24990-201ENSMUST00000157406 323 ntBASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Gm9136-201ENSMUST00000193368 454 ntBASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms