Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Gm37348-201ENSMUST00000193104 1789 ntBASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Gm24279-201ENSMUST00000104236 131 ntBASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 AC158392.3-201ENSMUST00000224271 1284 ntBASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 AC121357.1-201ENSMUST00000227365 608 ntBASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Gm5468-202ENSMUST00000227851 682 ntBASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Mir326-201ENSMUST00000083637 95 ntBASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx54Q8K4L0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm28937-201ENSMUST00000185413 695 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm29400-201ENSMUST00000187208 695 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm28662-201ENSMUST00000188446 695 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm28251-201ENSMUST00000188835 695 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm37318-201ENSMUST00000194325 695 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm38017-201ENSMUST00000194768 695 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm34379-201ENSMUST00000195036 290 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm37287-201ENSMUST00000195449 695 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm37793-201ENSMUST00000195548 695 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm43547-201ENSMUST00000197729 328 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm35960-201ENSMUST00000202712 767 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 AC134537.1-201ENSMUST00000219205 265 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm8181-201ENSMUST00000062242 669 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.55■□□□□ 0.08
Ddx54Q8K4L0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms