Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clrn1Q8K445 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.28□□□□□ -0.6
Clrn1Q8K445 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.28□□□□□ -0.6
Clrn1Q8K445 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Clrn1Q8K445 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clrn1Q8K445 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clrn1Q8K445 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Clrn1Q8K445 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clrn1Q8K445 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Clrn1Q8K445 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.27□□□□□ -0.61
Clrn1Q8K445 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.27□□□□□ -0.61
Clrn1Q8K445 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.27□□□□□ -0.61
Clrn1Q8K445 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.27□□□□□ -0.61
Clrn1Q8K445 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.27□□□□□ -0.61
Clrn1Q8K445 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.27□□□□□ -0.61
Clrn1Q8K445 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.27□□□□□ -0.61
Clrn1Q8K445 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clrn1Q8K445 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.26□□□□□ -0.61
Clrn1Q8K445 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm43962-201ENSMUST00000203898 190 ntBASIC11.26□□□□□ -0.61
Clrn1Q8K445 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.26□□□□□ -0.61
Clrn1Q8K445 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.26□□□□□ -0.61
Clrn1Q8K445 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Clrn1Q8K445 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.26□□□□□ -0.61
Clrn1Q8K445 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.26□□□□□ -0.61
Clrn1Q8K445 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clrn1Q8K445 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.25□□□□□ -0.61
Clrn1Q8K445 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Pck2-205ENSMUST00000226352 2784 ntBASIC11.25□□□□□ -0.61
Clrn1Q8K445 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.25□□□□□ -0.61
Clrn1Q8K445 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.25□□□□□ -0.61
Clrn1Q8K445 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Gm18893-201ENSMUST00000198416 943 ntBASIC11.25□□□□□ -0.61
Clrn1Q8K445 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.25□□□□□ -0.61
Clrn1Q8K445 Gm4607-201ENSMUST00000206649 577 ntBASIC11.25□□□□□ -0.61
Clrn1Q8K445 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clrn1Q8K445 Gm5455-201ENSMUST00000058710 715 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms