Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 Gm25545-201ENSMUST00000122673 323 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 Gm26047-201ENSMUST00000157308 113 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Gm42816-201ENSMUST00000198433 325 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 Gm26047-202ENSMUST00000198840 115 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Gm18514-201ENSMUST00000218980 436 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.48□□□□□ -0.25
Syne4Q8CII8 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Syne4Q8CII8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.47□□□□□ -0.25
Syne4Q8CII8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Gm18561-201ENSMUST00000206027 804 ntBASIC13.47□□□□□ -0.25
Syne4Q8CII8 Mt1-202ENSMUST00000211807 1085 ntBASIC13.47□□□□□ -0.25
Syne4Q8CII8 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.47□□□□□ -0.25
Syne4Q8CII8 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.47□□□□□ -0.25
Syne4Q8CII8 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne4Q8CII8 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.47□□□□□ -0.25
Syne4Q8CII8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.46□□□□□ -0.25
Syne4Q8CII8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Syne4Q8CII8 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms