Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rftn2Q8CHX7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Gm22920-201ENSMUST00000102175 109 ntBASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Gm15352-201ENSMUST00000118696 270 ntBASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Gm38151-201ENSMUST00000195085 289 ntBASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rftn2Q8CHX7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Gm8737-201ENSMUST00000122208 642 ntBASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Gm12407-201ENSMUST00000180219 324 ntBASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Gm45770-201ENSMUST00000212105 616 ntBASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rftn2Q8CHX7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms