Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Gm13875-201ENSMUST00000120162 282 ntBASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Gm12390-201ENSMUST00000117897 397 ntBASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28aQ8CEI3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Gm14441-201ENSMUST00000121960 540 ntBASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms