Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm13315-201ENSMUST00000120376 991 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm14999-201ENSMUST00000121039 624 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm6963-201ENSMUST00000147879 379 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm23119-201ENSMUST00000158610 140 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm8385-201ENSMUST00000058999 643 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup88Q8CEC0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Gm13296-201ENSMUST00000117854 997 ntBASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Gm9083-201ENSMUST00000120423 819 ntBASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Gm18304-201ENSMUST00000189162 546 ntBASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Gm8913-201ENSMUST00000209491 641 ntBASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup88Q8CEC0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms