Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Gm13182-201ENSMUST00000122241 312 ntBASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Gm17877-201ENSMUST00000192578 814 ntBASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Gm43058-201ENSMUST00000197645 625 ntBASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm8492-201ENSMUST00000182375 987 ntBASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm38314-201ENSMUST00000195709 625 ntBASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm17825-201ENSMUST00000206836 794 ntBASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 CT573047.1-201ENSMUST00000223652 851 ntBASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm23105-201ENSMUST00000083719 134 ntBASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim52Q8CDV4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Gm25072-201ENSMUST00000175233 235 ntBASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim52Q8CDV4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms