Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gm11597-201ENSMUST00000121423 964 ntBASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gm25261-201ENSMUST00000157416 134 ntBASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gm18584-201ENSMUST00000203098 964 ntBASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Olfr582-201ENSMUST00000098212 960 ntBASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lrif1Q8CDD9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm12241-201ENSMUST00000118330 726 ntBASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm12036-201ENSMUST00000120008 530 ntBASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm11591-201ENSMUST00000120063 702 ntBASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm24548-201ENSMUST00000158650 108 ntBASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm29396-201ENSMUST00000185659 716 ntBASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm44364-201ENSMUST00000198368 141 ntBASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm18935-201ENSMUST00000212692 664 ntBASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Gm9823-201ENSMUST00000051212 327 ntBASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lrif1Q8CDD9 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Gm9083-201ENSMUST00000120423 819 ntBASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms