Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gm12058-201ENSMUST00000118614 437 ntBASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gm15610-201ENSMUST00000120584 195 ntBASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gm1335-201ENSMUST00000121653 386 ntBASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gm27023-201ENSMUST00000182372 285 ntBASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gm38314-201ENSMUST00000195709 625 ntBASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gm43818-201ENSMUST00000200605 466 ntBASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gm10254-201ENSMUST00000052888 867 ntBASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lysmd4Q8CC84 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Gm24548-201ENSMUST00000158650 108 ntBASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Gm7653-201ENSMUST00000214567 508 ntBASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Lect2-202ENSMUST00000225183 823 ntBASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Lysmd4Q8CC84 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms