Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa4Q8CA71 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa4Q8CA71 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa4Q8CA71 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa4Q8CA71 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Gm8731-201ENSMUST00000118088 412 ntBASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.81□□□□□ -0.2
Shisa4Q8CA71 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Shisa4Q8CA71 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Gm8815-201ENSMUST00000173809 620 ntBASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Mir8093-201ENSMUST00000185043 137 ntBASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Gm38151-201ENSMUST00000195085 289 ntBASIC13.8□□□□□ -0.2
Shisa4Q8CA71 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Lect2-202ENSMUST00000225183 823 ntBASIC13.8□□□□□ -0.2
Shisa4Q8CA71 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.8□□□□□ -0.2
Shisa4Q8CA71 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa4Q8CA71 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.79□□□□□ -0.2
Shisa4Q8CA71 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa4Q8CA71 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa4Q8CA71 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa4Q8CA71 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa4Q8CA71 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa4Q8CA71 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Shisa4Q8CA71 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms