Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Rubie-203ENSMUST00000227803 2430 ntBASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Gm37666-201ENSMUST00000194110 866 ntBASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Gm5705-201ENSMUST00000066241 711 ntBASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim9Q8C7M3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim9Q8C7M3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 AY036118-201ENSMUST00000200021 923 ntBASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim9Q8C7M3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms