Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Gm13611-201ENSMUST00000118269 318 ntBASIC12.06□□□□□ -0.48
Ubr7Q8BU04 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Gm10774-201ENSMUST00000188689 204 ntBASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Mir7686-201ENSMUST00000200604 57 ntBASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubr7Q8BU04 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm8731-201ENSMUST00000118088 412 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Mir1943-201ENSMUST00000158276 73 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm28937-201ENSMUST00000185413 695 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm29400-201ENSMUST00000187208 695 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm28662-201ENSMUST00000188446 695 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm28251-201ENSMUST00000188835 695 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm37318-201ENSMUST00000194325 695 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm38017-201ENSMUST00000194768 695 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm37287-201ENSMUST00000195449 695 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm37793-201ENSMUST00000195548 695 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubr7Q8BU04 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.04□□□□□ -0.48
Ubr7Q8BU04 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.04□□□□□ -0.48
Ubr7Q8BU04 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.04□□□□□ -0.48
Ubr7Q8BU04 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.04□□□□□ -0.48
Ubr7Q8BU04 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms