Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Gm18624-201ENSMUST00000220966 658 ntBASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Gm5867-201ENSMUST00000063197 592 ntBASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Gm24136-201ENSMUST00000083374 165 ntBASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco3Q8BQM7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Gm14057-201ENSMUST00000120631 482 ntBASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Gm2231-201ENSMUST00000125661 612 ntBASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Gm27243-201ENSMUST00000183964 521 ntBASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco3Q8BQM7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms