Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdhr3Q8BL00 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm14660-201ENSMUST00000119809 575 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm8602-201ENSMUST00000184045 607 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdhr3Q8BL00 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Gm10434-201ENSMUST00000101158 471 ntBASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Mir1247-201ENSMUST00000116706 82 ntBASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Gm6023-201ENSMUST00000118217 606 ntBASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.41□□□□□ -0.74
Cdhr3Q8BL00 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms