Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Gm1848-201ENSMUST00000120711 789 ntBASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Gm11836-201ENSMUST00000121022 441 ntBASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Gm12407-201ENSMUST00000180219 324 ntBASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Gm37905-201ENSMUST00000195310 341 ntBASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gm14942-201ENSMUST00000119642 336 ntBASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gm43520-201ENSMUST00000197996 164 ntBASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gm6450-201ENSMUST00000200896 574 ntBASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gm17931-201ENSMUST00000208132 634 ntBASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcal1Q8BJL0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcal1Q8BJL0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.73□□□□□ -0.37
Smarcal1Q8BJL0 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.73□□□□□ -0.37
Smarcal1Q8BJL0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smarcal1Q8BJL0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcal1Q8BJL0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcal1Q8BJL0 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcal1Q8BJL0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smarcal1Q8BJL0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcal1Q8BJL0 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.73□□□□□ -0.37
Smarcal1Q8BJL0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms